Table 2. Haplotypic data for the breeds typed for the Y1-Y2-Y3 SNPs and the two microsatellite loci, INRA189 and BM861.
Geographic grouping | SNPs | Mean number of samples / breed | Microsatellites | Mean number of samples / breed | Total number of haplotypes | Haplotype diversity (± SD) | ||
Breeds | Samples | Breeds | Samples | |||||
India (IND) | 2 | 16 | 8.0 | 2 | 16 | 8.0 | 1 | 0.000±0.0 |
Africa (AFR) | 1 | 14 | n/a | 1 | 12 | n/a | 3 | 0.247±0.2 |
Southwest Asia (SWA) | 7 | 25 | 3.6 | 7 | 24 | 3.4 | 7 | 0.574±0.4 |
Podolian (POD) | 12 | 184 | 15.3 | 8 | 79 | 9.9 | 4 | 0.193±0.2 |
Iberian (IBE) | 31 | 651 | 21.0 | 27 | 568 | 21.0 | 11 | 0.335±0.2 |
Central (CEN) | 30 | 453 | 15.1 | 17 | 230 | 13.5 | 5 | 0.056±0.1 |
British (BRT) | 10 | 164 | 16.4 | 8 | 127 | 15.9 | 5 | 0.413±0.3 |
Nordic (NOR) | 14 | 95 | 6.8 | 14 | 82 | 5.9 | 4 | 0.222±0.2 |
Baltic Red (BHR) | 9 | 77 | 8.6 | 7 | 63 | 9.0 | 3 | 0.126±0.1 |
North-West (NWE) | 5 | 126 | 25.2 | 4 | 90 | 22.5 | 2 | 0.112±0.1 |
Lowland Pied (LLP) | 9 | 208 | 23.1 | 8 | 106 | 13.3 | 3 | 0.072±0.1 |
Eastern (EAS) | 8 | 74 | 9.3 | 8 | 75 | 9.4 | 5 | 0.373±0.3 |
Overall | 138 | 2087 | 15.1 | 111 | 1472 | 13.3 | 19 | 0.422±0.3 |