Table 1. Representation of Eucarida species in the public databases (at 15/07/10).
Species | No of ESTs in database | BLASTn matches | tBLASTx matches | ||||
krill 454 | ESTs | % match | krill 454 | ESTs | % match | ||
Euphausia superba | 3095 | 2177 | 2567 | 83 | 2560 | 2547 | 82 |
Fenneropenaeus chinensis | 10511 | 556 | 1706 | 16 | 1759 | 3717 | 35 |
Penaeus monodon | 35690 | 968 | 10464 | 29 | 3141 | 15400 | 43 |
Litopenaeus vannamei | 162755 | 1412 | 24482 | 15 | 4893 | 63145 | 39 |
Number of species-specific ESTS and the number of krill ESTs that match a corresponding number of Eucarida ESTs.