Table 1.
pH dependence of kpep for different aminoacyl-tRNAs at 20 °C
Aminoacyl-tRNA |
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Asn-tRNAAsn | 6.8 | 5.9 ± 0.2 | 11 ± 1 | 11 ± 1 |
Phe-tRNAPhe | 7.2 | 6.1 ± 0.1 | 28 ± 1 | 27 ± 1 |
Ile-tRNAIle | 7.8 | 6.1 ± 0.2 | 22 ± 1 | 21 ± 1 |
Ala-tRNAAla | 7.9 | 6.3 ± 0.1 | 25 ± 2 | 24 ± 1 |
Gly-tRNAGly | 7.8 | 7.36 ± 0.04 | 13 ± 1 | 7.6 ± 0.2 |
Pro-tRNAPro | 8.6 | 7.8 ± 0.2 | 17 ± 5 | 6.0 ± 0.5 |
*pKa of the α-NH2 group of aa-tRNA in bulk water (see Materials and Methods).
†kpep, calculated at pH 7.5 from fits of experimental data (Fig. 3 B–G).