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. Author manuscript; available in PMC: 2011 Oct 1.
Published in final edited form as: Proteomics. 2010 Oct;10(19):3515–3524. doi: 10.1002/pmic.200900727

Figure 1.

Figure 1

An overview of phoMSVal. Data are obtained from a phosphospecific mass spectrometry experiment, the spectra are analyzed by Mascot and the data are stored in a database. For each spectrum, features are extracted and used as input into a classifier that separates spectra into two classes: correct or incorrect peptide assignments.