Table 5.

Overall function prediction statistics across all species combinations.

species	# terms	P	Rpp	# terms	P	Rpp	# terms	P	Rpp
rno	17430	0.50	0.12	9110	0.57	0.14	5738	0.75	0.20
mmu	26089	0.47	0.13	11441	0.59	0.16	5246	0.81	0.23
hsa	62833	0.44	0.14	22911	0.59	0.17	12317	0.76	0.39
dme	26155	0.56	0.19	19463	0.60	0.20	10455	0.75	0.30
cel	4098	0.52	0.14	1983	0.60	0.18	1332	0.71	0.24
sce	10666	0.66	0.23	9013	0.69	0.25	6335	0.81	0.35

Total number of newly derived GO annotations and their estimated average precision (P) and per-protein recall (Rpp) for each species using low, medium and high similarity thresholds.