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. 2010 Aug 19;39(1):248–256. doi: 10.1093/nar/gkq713

Table 1.

Sequences of the lead peptides L-22 and KP-Z-41 and summary of their binding activities against HIV-1 TAR RNA (Kd values are in nanomolar), as determined by EMSA in the absence of competitor tRNA

Mimetic Residue Kd (HIV)
L-22 R1 V2 R3 T4 R5 K6 G7 R8 R9 I10 R11 I12 30
KP-Z-41 R1 V2 R3 C4 R5 Q6 R7 K8 G9 R10 R11 I12 C13 I14 R15 I16 1

Residues are aligned in the table to represent similarity in position upon binding HIV-1 TAR.