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. 2010 Sep 2;39(1):30–43. doi: 10.1093/nar/gkq736

Table 4.

Average log-odd ratios for two binding sites to be co-localized

Homodimer Heterodimer Peptide S.Peptide DNA RNA Ligand Solvent
Homodimer 0.12 0.13 −0.35 −0.30 −0.02 −0.60 −0.09 0.02
Heterodimer 0.13 0.79 0.63 0.09 −0.85 0.12 −0.06
Peptide −0.35 0.79 −0.02 0.84 −0.09 −0.23
S.Peptide −0.30 0.63 0.84 0.30 −0.15
DNA −0.02 0.09 0.34 0.63 −0.12
RNA −0.60 −0.85 2.37 0.43 0.04
Ligand −0.09 0.12 −0.09 0.30 0.63 0.43 −1.56 0.15
Solvent 0.02 −0.06 −0.23 −0.15 −0.12 0.04 0.15 −0.01

Each cell corresponds to the log-odd ratio of the observed probability of having a binding site type A overlapping a binding site type B over the expected probability of having A and B overlapping. Positive values indicate favorable overlapping/polyvalence between the binding site types A and B, whereas negative values indicate unfavorable overlapping/polyvalence. Empty cells are unsolved values due to an insufficient number of overlaps between the two considered binding sites; however, they should indicate low log-odd values.