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. Author manuscript; available in PMC: 2012 Feb 5.
Published in final edited form as: Virology. 2010 Dec 3;410(1):181–191. doi: 10.1016/j.virol.2010.11.008

Table 2.

Sequence Variation Between HVS1 Strains MV-5-4 and 4672

Genome Area Compared Sequence Differences (MV-5-4 → 4672)
Genome Coordinates Length Genes Covered Coordinate Type Result
23,312 - 24,358 1047 nt UL42 - UL44 23,961 C → A Noncoding
117,352 - 118,332 981 nt RL2 Exon 1 - RL1/2 IG 118,302 Insertion (A) Noncoding
118,860 - 119,243 384 nt RL1/2 IG - RL1 Intron 2 None
119,727 - 120,894 1168 nt RL1 Intron 2 - RL1/RS1 IG 120,129 C → T RL1 Exon 1 (silent)
120,885 Deletion (G) Noncoding
136,938 - 137,730 793 nt US3 - US4 None
138,424 - 139,282 859 nt US5 - US6 138,757 C → T Noncoding
143,015 - 144,686 1672 nt US8 - US1 143,260 C → T US8 (silent)
144,205 Insertion (C) Noncoding
144,243 A → G Noncoding
144,377 Insertion (G) Noncoding
144,622 Insertion (T) Noncoding