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. 2010 Jun 3;10:101. doi: 10.1186/1471-2229-10-101

Table 1.

Characteristics of the full-length cDNA sequences coding for wheat PDI-like proteins cloned in this study.

Clone Full length cDNA TC sequence Orthologous rice gene Protein identity
UTR5'
(nt)
UTR3'
(nt)
ORF
(nt)
(DFCI wheat Gene index) Previous name* This study Acc. number cDNA
TaPDIL2-1 63 109 1767 TC301880 OsPDIL1-4 OsPDIL2-1 AK071514 408/561 (72.73%)
TaPDIL3-1 141 110 1626 TC353685 OsPDIL1-5 OsPDIL3-1 AK073970 437/529 (82.61%)
TaPDIL4-1a 74 139 1104 TC300461 OsPDIL2-1 OsPDIL4-1 AK103944 316/366 (86.34%)
TaPDIL4-1b 74 138 1104 TC300461 OsPDIL2-1 OsPDIL4-1 AK103944 317/366 (86.61%)
TaPDIL5-1a 55 150 1323 TC317379 OsPDIL2-3 OsPDIL5-1 AK062254 391/439 (89.07%)
TaPDIL5-1b 55 151 1323 TC317379 OsPDIL2-3 OsPDIL5-1 AK062254 397/439 (90.43%)
TaPDIL6-1a 13 240 456 TC294820 OsPDIL5-1 OsPDIL6-1 AK063663 121/146 (82.88%)
TaPDIL6-1b 13 255 450 TC294820 OsPDIL5-1 OsPDIL6-1 AK063663 119/146 (81.51%)
TaPDIL7-1a 37 289 1242 TC287269 OsPDIL5-2 OsPDIL7-1 AK069367 355/411 (86.37%)
TaPDIL7-1b 37 289 1254 TC287269 OsPDIL5-2 OsPDIL7-1 AK069367 359/416 (86.30%)
TaPDIL7-1c 37 289 1242 TC287269 OsPDIL5-2 OsPDIL7-1 AK069367 356/411 (86.62%)
TaPDIL7-2a 53 186 1257 TC287749 OsPDIL5-3 OsPDIL7-2 ND 311/416 (74.76%)
TaPDIL7-2b 53 186 1257 TC287749 OsPDIL5-3 OsPDIL7-2 ND 311/416 (74.76%)
TaPDIL8-1 122 226 1458 TC301351 OsPDIL5-4 OsPDIL8-1 AK099660 450/485 (92.78%)

a Nomenclature used by Houston et al. 2005 [24]; ND = no cDNA sequence available, tBLASTn searches of Gramene identified predicted transcript GRMT00000163510 (OsPDIL5-3/OsPDIL7-2) and the amino acid sequence was predicted from the available genomic sequence Os02g34530 [24].