Table 4.
Characteristics of three wheat genes identified to be syntenic and colinear genome sequences to the rice, Brachypodium and S. bicolor genome sequences.
| Rice Genome | S. bicolor Genome | Maize Genome | Brachypodium Genome | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Gene | Description | Gene Match | Chr1 position (strand) | Gene Match | Chr3 position (strand) | Gene Match* | AC217295.3 Position (strand) | Gene Match* | Super_13 position (strand) |
| TaEP1 | Expressed Protein | LOC_Os01 g68830 | 39991137-39993669 (+) | Sb03 g043790 | 71051976-71055103 (+) | ZmEP1 | 65318-67814 (+) | BdEP1 | 1312106-1314592 (+) |
| TaCRP1 | Expressed Protein | LOC_Os01 g68840 | 39997846-39997379(-) | Sb03 g043800 | 71059536-71060101(-) | ZmCRP1 | 117899-118353 (-) | BdCRP1 | 1317872-1318293 (-) |
| TaZFN1 | Putative zinc finger CCCH type domain- containing protein |
LOC_Os01 g68860 | 40009733-40005685 (-) | Sb03 g043810 | 71062164-71067135 (-) | ZmZFN1 | 119558-125029 (-) | BdZFN1 | 1319767-1324280 (-) |
*denotes the Brachypodium and maize genes that were annotated along with wheat in this study.