Table 3.
Nucleotide diversity and neutrality test of ZmGW2-CHR4 and ZmGW2-CHR5
| Gene | Region | Na | Size (bp)b | Sc | Hd | π (× 10-3)e | Tajima's Df |
|---|---|---|---|---|---|---|---|
| ZmGW2-CHR4 | 5' end | 116 | 689 | 22 | 11 | 7.7 | 0.80 |
| middle | 118 | 665 | 2 | 2 | 1.5 | 2.51* | |
| 3' end | 115 | 495 | 5 | 6 | 1.8 | -0.08 | |
| Total | 112 | 1849 | 29 | 21 | 3.9 | 0.97 | |
| ZmGW2-CHR5 | 5' end | 111 | 585 | 9 | 9 | 2.6 | -0.47 |
| middle | 117 | 694 | 28 | 7 | 6.3 | -0.51 | |
| 3' end | 120 | 658 | 12 | 7 | 3.4 | 0.01 | |
| Total | 109 | 1937 | 46 | 19 | 4.2 | -0.27 |
*, P < 0.05
a The number of analyzed maize inbred lines
b The total number of sites (excluding sites with gaps/missing data)
c The number of segregating sites (excluding InDels)
d The number of haplotypes
e The number of nucleotide differences per site between two randomly chosen sequences
f The D value calculated according to the polymorphic sites