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. 2010 Nov 17;10:251. doi: 10.1186/1471-2229-10-251

Figure 4.

Figure 4

DNA sequence alignment depicting the molecular basis of UGMS fragment length polymorphism among Saccharum complex, varieties and five cereals. Multiple sequence alignment of 10 size variant alleles showing both stepwise and mixed distributions amplified from sugarcane species, genera, varieties and five cereals for the two UGMS marker loci namely, UGSuM2 (A) and UGSuM27 (B). Variation in the number of repeats of (AT)n and (GGC)n microsatellite motifs at UGSuM2 and UGSuM27 loci, respectively and additional nucleotide insertions/deletions in the flanking sequences of the repeats are highlighted.