Figure 6.

Alignment, and predicted protein structure and catalytic domain binding sites depicting the functional relevance of microsatellite carrying unigenes. Multiple sequence alignment of the four size variant alleles showing step-wise distribution in the amylase catalytic domain amplified from sugarcane species, genera, varieties and five cereals using primer (UGSuM26) for β-amylase unigene. Variation in the number of repeat-units of CT and the encoding repeated tracts of Leucine-Serine aminoacid residues at a microsatellite locus predicted different three dimensional protein structures and protein-ligand complex binding sites which are highlighted.