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. 2010 Oct 19;10:223. doi: 10.1186/1471-2229-10-223

Table 1.

Constructs investigated in this study

Construct name Protein sequencea Net chargeb Localizationc
FcpD-eGFP ...FAPAKNAARTSVATT-MVSK... +3 S
FcpD-eGFP_K4E ...FAPAKNAARTSVATT-MVSE... +1 S
FcpD-eGFP_K4A ...FAPAKNAARTSVATT-MVSA... +2 S
FcpD_K20E+R24E-eGFP_K4E ...FAPAENAAETSVATT-MVSE... -3 ER
FcpD_K20R-eGFP_K4R ...FAPARNAARTSVATT-MVSR... +3 S
FcpD_K20A+R24A-eGFP_K4A ...FAPAANAAATSVATT-MVSA... 0 PPC
FcpD_K20E+R24E-eGFP ...FAPAENAAETSVATT-MVSK... -1 ER/PPC
FcpD_K20E+N21K+R24E-eGFP ...FAPAEKAAETSVATT-MVSK... 0 PPC
FcpD_K20E+N21K+R24E-eGFP_K4E ...FAPAEKAAETSVATT-MVSE... -2 ER
FcpD_K20A+R24A-eGFP ...FAPAANAAATSVATT-MVSK... +1 PPC
FcpD_K20E+N21R+R24E-eGFP_K4R ...FAPAERAAETSVATT-MVSR... 0 PPC
FcpD_K20E+N21R+R24E-eGFP_K4E ...FAPAERAAETSVATT-MVSE... -2 ER
FcpD_Δ20-30-eGFP ...FAPA-MVSK... +1 S
FcpD_Δ20-30-eGFP_K4R ...FAPA-MVSR... +1 S
FcpD_Δ20-30-eGFP_K4E ...FAPA-MVSE... -1 ER
FcpD_Δ20-30-eGFP_K4A ...FAPA-MVSA... 0 PPC
FcpD_3xSpacer-eGFP ...FAPAKNAARTSVATT-[M(GGGGP)5]3-MVSK... +2 S
FcpD_Δ20-30-Spacer-eGFP ...FAPA-[M(GGGGP)5]-MVSK... 0 S
FcpD_Δ20-30-2xSpacer-eGFP ...FAPA-[m(GGGGP)5]2-MVSK... 0 S
FcpD_Δ20-30-3xSpacer-eGFP ...FAPA-[M(GGGGP)5]3-MVSK... 0 ER
FcpD_Δ20-30-3xSpacer_G4K-saGFP11 ...FAPA-[M(GGKGP)-(GGGGP)4]3-MVSK... +1 ER/S

aSequence of the FcpD transit peptide, of the eGFP N-terminus and, in spacer constructs, of the synthetic spacers separated by hyphens, respectively; charged amino acids (or substituted alanines) in bold; bCalculated from the bold-faced amino acids, in spacer constructs up to the end of the first spacer; cS: stroma; ER: endoplasmic reticulum; PPC: periplastid compartment.