Table 5.
Primer sequences used in qRT-PCR
| Probe ID | Gene Name | NCBI accession no. | Forward primer (5'->3') | Reverse primer (5->3') |
|---|---|---|---|---|
| Bt.5323.1.S1_at | SH3 domain YSC-like 1 (SH3YL1) | CB535095 | ACCAACCCATAGAAGTGACAGCAC | CGAAGCTTTCCTTCCCACCAATCA |
| Bt.15675.1.S1_at | ADAM metallopeptidase with thrombospondin motif 4 (ADAMTS4) | NM_181667 | AGTTCGACAAGTGCATGGTGTGTG | TGGTGACCACGTTGTTGTATCCGT |
| Bt.21021.1.S1_at | TBC1 domain family, member 7 (TBC1D7) | CB451394 | CTTCGTGAACCAGCTGAACAGCAA | CGGCAAAGCACTTCTTGAACCACA |
| Bt.2933.1.S1_at | Hypothetical protein LOC788205 | CK972377 | GCCAAAGCAGCTGTCGGTAATGAA | TCCATCACACCGCGAAGACTCTAA |
| Bt.9767.1.S1_a_at | Squalene epoxidase (SQLE) | CK949309 | AGTAATCATCGTGGGATCTGGCGT | ACCTGGGCATCAATACCTTCCACT |
| Bt.621.1.S1_at | Cytochrome P450, family 51, subfamily A (CYP51A) | BE664559 | GTATGACCTCAACAACCCTGCCAA | TGACCACGACGATGATGAAGACCA |
| Bt.23903.1.A1_at | Unknown | BP102962 | ACACAGGCCGTGCAAACTAAACAC | TCTTGATTTGCTGCTGGGACCTCT |
| Bt.22362.1.S1_at | SH3-domain kinase binding protein 1 (SH3KBP1) | CK774919 | TGAGGGATGCACAGATGAGTGTGA | TTGAAGGCTGGAGGGCACATCTTT |
| Bt.16752.1.A1_at | ATP binding protein (TXNDC9) | CB536841 | TTCATCTGCTGATGGCCACACTC | AGAGAATCCAGACTCTCCTCAGA |
| Bt.1020.1.S1_at | CDC-like kinase 1 (CDClk1) | CK848317 | TTTAGGATGGTCCCAGCCATGTGA | GCCCAAGAATCCTTTCCATCATTGCC |
| Bt.19107.2.A1_at | Transcribed locus | BE723026 | CCATGAGAACTGACTCGGGAGTTT | CAGGCTGTCTGGCAAGCAACAATA |
| Bt.28011.1.S1_at | Unknown | CK940528 | AGGAAGAACCTTCTGTCCCAGCTT | TTGAGACTTCCCAGGTCAAAGGCA |
| Bt.22718.1.A1_at | Proteasome (prosome, macropain) activator subunit 4 | CK945034 | GCTGAGGTGTGGGTTTGTTTGAGT | AAACTGGTCACAGGCAAACACG |
| Bt.19107.1.S1_at | Transcribed locus | BE723026 | GACCCAAGAGTTGCTTAAGAGAGC | ACCCTCAGTCCACAGATGATCAAG |
| Bt.25102.1.S1_a_at | Hypothetical LOC509649 | CK772143 | TTCCTCCCACTGGTGAGCATCTTT | TGTGTTGCTCAGTGTTCTCCTCCA |
| Bt.22038.1.S1_a_at | Arginyl-tRNAsynthetase (RARs) | CK947459 | TTGAAGGCTGCTCAGACCTCTGTT | TAAGCCGCTGTGTTTCCTCTGTCA |
| Bt.21268.1.S2_at | Ribosomal protein S6 kinase, 70kDa (TUBD1) | CK977623 | CGTGACTGTAGATGGTGAAAGGGT | TGCACACTCAGACTGAAGACAC |
| Bt.13342.1.S1_at | Src-associated protein SAW (UTP15) | BM030756 | CTCATAGCCATCAATAGTTCAGTGC | TCAAGTAGCAAATACTACAGTTTGTC |
| Bt.344.1.S1_at | Major histocompatibility complex, class II | D76416.1 | TCACACCAGCACCCTCTGATCTTT | TAAGCACGGCTTTCGGCAGTAGAA |
| Bt.21827.2.S1_at | Thimetoligopeptidase 1 (THOP1) | CB444022 | AAGGTCTCCATCTGGAGGTGTTTG | AACTCCCAGGAAAGGGCTGCATT |
| Bt.21794.1.S1_at | Hypothetical protein LOC777601 | CA034934 | CATGAGACACAGGCGAAACACTGA | TCTTTGGGAGAAAGGGAAACTGGG |
| G3PDH | Glyceride 3 phosphatate dehydrogenase | AY779626 | GGGTCATCATCTCTGCACCT | GGTCATAAGTCCCTCCACGA |
| IL17A | Interleukin 17A | CB432107 | TCATCATCCCACAGAGTCCA | GGAGAGTCCAAGGTGAGGTG |
| TNFα | Tumor necrosis factor | CK848164 | GGCCATGGTATTGACATCCT | GGATCTTCTCCACCACATCG |
| TGFβ1 | Transforming growth factor beta 1 | CK772652 | ACTACATCTCGGCGCTCAGT | GAAGGTGCAGGTGAAGTGGT |