TABLE 3.
Average sequence diversity values for candidate and reference genes
| Diversity statistics | Elites | Landraces | Wilds |
|---|---|---|---|
| Candidate genes (13 loci) | |||
| n | 35.7 (0.3) | 37.9 (0.2) | 44 (0.9) |
| L | 686.3 (30.9) | 683.9 (30.9) | 671.5 (32.2) |
| S | 6.6 (2.1) | 14.9 (3.3) | 43.5 (6.4) |
| h | 2.4 (0.3) | 7.5 (1.1) | 23.6 (1.8) |
| π | 0.0026 (0.0010) | 0.0056 (0.0013) | 0.0101 (0.0013) |
| θw | 0.0024 (0.0007) | 0.0053 (0.0012) | 0.0149 (0.0021) |
| Reference genes (7 loci) | |||
| n | 36 (0.0) | 38 (0.0) | 46 (0.0) |
| L | 601.1 (38.6) | 593.6 (40.4) | 608 (41.9) |
| S | 12.43 (1.2) | 24.71 (4.3) | 51.17 (6.5) |
| h | 4.714 (0.9) | 12 (2.4) | 31.5 (2.9) |
| π | 0.0056 (0.0010) | 0.0095 (0.0013) | 0.0129 (0.0018) |
| θw | 0.005 (0.0006) | 0.01 (0.0016) | 0.02 (0.0028) |
Parameters listed include the average number of sequences (n), average sequence length (L), average number of segregating sites (S), average number of haplotypes (h), average pairwise nucleotide diversity (π), and average Watterson's estimator of diversity (θw). Values in parentheses are standard errors.