Table 2.
Pathway analysis from Plus2.0 array
| Pathways | Number of genes | p value |
|---|---|---|
| Aminoacyl-tRNA biosynthesis | 18 | 1.50×10-07 |
| Cell cycle | 47 | 6.67×10-05 |
| Folate biosynthesis | 19 | 2.44×10-06 |
| Glycerophospholipid metabolism | 19 | 0.0158 |
| Oxidative phosphorylation | 25 | 0.0176 |
| Purine metabolism | 50 | 2.86×10-07 |
| Pyrimidine metabolism | 33 | 6.26×10-07 |
| Starch and sucrose metabolism | 21 | 0.000845 |
| Ubiquitin mediated proteolysis | 21 | 0.00116 |
| Wnt signaling pathway | 42 | 0.0453 |
Based on the complete content of the Plus2.0 array for 3296 genes passing flags, 1.3-fold change and t-test in the sensitive experiment. Displayed are the numbers of genes from a given pathway that are detected, differentially expressed and also passing a t-test filter. Pathways selected that are statistically significant based on hypergeometric statistics.