Table 4.
Sense and antisense in vitro analysis
| DSA-specific probesets | Sense | Antisense | SAS pairs |
|---|---|---|---|
| All probesets | 6073 | 5324 | 2456 |
| Sensitive experiment Detection | 638 | 661 | 45 |
| Resistant experiment Detection | 724 | 760 | 68 |
| Sensitive experiment Detection + DE | 267 | 234 | 9 |
| Resistant experiment Detection + DE | 215 | 223 | 8 |
Table displaying the number of genes (DSA-specific) in the sense and antisense orientation for the 5-FU sensitive and resistant in vitro experiment. Also displayed is the total number of probesets that are represented in both the sense and antisense orientation (SAS pairs). All analyses include genes identified from detection +/- differential expression filtering. Acronyms used: DSA: Disease-specific array, SAS: sense:antisense pairs, Detection: probesets passing Affymetrix flag calls, DE: differential expression.