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. 2010 Oct 11;55(1):190–196. doi: 10.1128/AAC.00672-10

TABLE 2.

Details of the DNA primers used in this investigation

Gene amplified or primer set (purpose or description) Forward primer Reverse primer Amplimer size (bp)
16S rRNA 5′-GAGAAGAACGAGTGTGAGAG-3′ 5′-CTAACACCTAGCACTCATCG-3′ 391
patA (sequencing) 5′-TCTTGCTCAGTCCATCATCGAATAT-3′ 5′-CCGCTGTGGATTAGTTCATTTCC-3′ 2,963
patB (sequencing) 5′-AGAATCCAGTCCAGCGAAAGCT-3′ 5′-GAAAGAACGACCAGATGTTCCAAT-3′ 2,959
patA (expression) 5′-ATGTTGTCCTCGCAGCCTAT-3′ 5′-ACGAACCGATGAACAAGAGG-3′ 212
patB (expression) 5′-TTGCTGGTTCGGCTGTACTT-3′ 5′-AACTGCTGTCATCTGGCCTT-3′ 330
hexA (expression) 5′-GAGAATGCTCGCTCAGGTAA-3′ 5′-TCACATGAGGAGCTTCAGGA-3′ 421
1 (patA forward primer + transposon primer) 5′-TCTTGCTCAGTCCATCATCGAATAT-3′ 5′-CCGGGGACTTATCAGCCAACC-3′ 1,445
2 (patA reverse primer + transposon primer) 5′-CCGCTGTGGATTAGTTCATTTCC-3′ 5′-CCGGGGACTTATCAGCCAACC-3′ 1,566
3 (patB forward primer + transposon primer) 5′-AGAATCCAGTCCAGCGAAAGCT-3′ 5′-CCGGGGACTTATCAGCCAACC-3′ 1,487
4 (patB reverse primer + transposon primer) 5′-GAAAGAACGACCAGATGTTCCAAT-3′ 5′-CCGGGGACTTATCAGCCAACC-3′ 1,520