TABLE 5.
Computational model and parameter or value | Total no. of ORFs on the array | Immunization with live EB |
Immunization with UV-EB |
||||
---|---|---|---|---|---|---|---|
No. of hits | Fold enrichmenta | P value | No. of hits | Fold enrichmenta | P value | ||
TMHMM | |||||||
0 | 694 | 129 | 0.91b | 0.020 | 53 | 0.98 | 0.77 |
≥1 | 214 | 56 | 1.28b | 0.020 | 18 | 1.08 | 0.77 |
≥5 | 69 | 11 | 0.78 | 0.44 | 3 | 0.56 | 0.35 |
≥10 | 26 | 5 | 0.94 | 1.0 | 1 | 0.49 | 0.71 |
SignalP | |||||||
≥0.7c | 134 | 41 | 1.50b | 2.4 × 10−3 | 22 | 2.10b | 3.2 × 10−4 |
<0.7 | 774 | 144 | 0.91b | 2.4 × 10−3 | 49 | 0.81b | 3.2 × 10−4 |
PSORTb | |||||||
Cytoplasmic | 404 | 86 | 1.04 | 0.56 | 36 | 1.14 | 0.32 |
Cytoplasmic membrane | 195 | 38 | 0.96 | 0.76 | 11 | 0.72 | 0.23 |
Extracellular | 8 | 2 | 1.23 | 0.67 | 0 | 0.00 | 1.0 |
Outer membrane | 17 | 6 | 1.73 | 0.13 | 4 | 3.01b | 0.037 |
Periplasmic | 10 | 3 | 1.47 | 0.43 | 2 | 2.56 | 0.18 |
Unknown | 274 | 50 | 0.90 | 0.32 | 18 | 0.84 | 0.42 |
Total | 909 | 185 | 71 |
Relative to the percentage represented in the genome.
P value of <0.05.
Contains signal peptide.