TABLE 1.
NIH C57BL/6 defensin locus from telomere to centromere
| Gene identity or provisional symbol | Orientationa | Chromosome 8 position | Intergenic distance (kb) | MGIb designation |
|---|---|---|---|---|
| NT_039455.7 | ||||
| Defb5 | Cen | 19247592-19250828 | ||
| Defma1-ps | Tel | 19279000-19280000 | 29.2 | |
| Defb3 | Cen | 19293361-19295339 | 13.3 | |
| Defb54-ps | Cen | 19300677-19304794 | 9.5 | |
| Defma2-ps | Tel | 19318972-19319352 | 14.2 | Defa-ps13 |
| Defma3-ps | Cen | 19334863-19335554 | 15.5 | |
| Defma4-ps | Cen | 19358436-19359276 | 2.9 | |
| Defma5-ps | Cen | 19399300-19399900 | 40 | |
| Defma6-ps | Cen | 19422519-19423270 | 22.6 | Defa-ps14 |
| Defb8 | Tel | 19447606-19445769 | 24.3 | |
| Defma7-ps | Tel | 19473822-19473027 | 25.4 | Defa-ps15 |
| sim RpL19-ps | Cen | 19492902-19493633 | 19.1 | |
| Defb7 | Cen | 19495097-19497775 | 1.5 | |
| NT_039457.7 | ||||
| sim Defb52 | Tel | 22041664-22040297 | 15 | |
| Defb51 | Tel | 22057370-22056690 | 26.2 | |
| CRS4C-6 | Tel | 22084389-22083536 | 80.8 | AY761185 |
| Defcr21 | Cen | 22165224-22166196 | 19.2 | Defa21 |
| Defma8-ps | Cen | 22185400-22185900 | 8.8 | |
| Defcr23a | Cen | 22194745-22195694 | 9 | Defa23 |
| Defcr5a | Cen | 22204698-22205682 | 12.6 | |
| Defma9-ps | Cen | 22217800-22218000 | 5.5 | Defa-ps3 |
| Defcr25 | Cen | 22224119-22224965 | 6 | Defa25 |
| ribo L21 | Cen | 22231012-22231564 | 2.9 | |
| CRS1C-2 | Tel | 22234497-22235775 | 4 | |
| Zn MYM | Cen | 22239793-22241841 | 16.7 | |
| Hyb-Defma1-ps | Cen | 22258800-22259050 | 15.8 | Defa-ps4 |
| vDefcr24 | Cen | 22274295-22274509 | 27.4 | |
| Defcr22 | Cen | 22301954-22302925 | 19 | Defa22 |
| Defma10-ps | Cen | 22321900-22322400 | 8.9 | |
| Defcr23b | Cen | 22331291-22332556 | 8.7 | Defa-rs7 |
| vDefcr5 | Cen | 22341236-22342220 | 16.7 | |
| Defma11-ps | Cen | 22358600-22358850 | 5.6 | Defa-ps5 |
| vDefcr18-ps (Crpi) | Cen | 22365083-22365927 | 5.6 | Defa-ps6 |
| CRS1C-ps | Tel | 22371500-22372500 | 4.9 | Defa-ps7 |
| Zn-MYM | Cen | 22376351-22377865 | 11.6 | |
| Defcr26 | Cen | 22389424-22390231 | 20.8 | |
| Defma12-ps | Cen | 22410300-22410600 | 15.1 | |
| Defcr3 | Cen | 22427120-22427963 | 9.1 | Defa3 |
| Defcr5b | Cen | 22437071-22438055 | 10.9 | Defa5 |
| Defma13-ps | Cen | 22448800-22449050 | 5.2 | |
| vDefcr2-ps | Cen | 22455223-22456123 | 7.9 | |
| ribo L21 | Cen | 22464000-22474000 | 1.5 | |
| CRS1C(-4a) | Tel | 22465565-22466700 | 3.3 | Defa-rs1 |
| Zn-MYM | Cen | 22470000-22471000 | 11.3 | |
| Hyb-Defma2-ps | Cen | 22482263-22485701 | 10.1 | Defa-ps16 |
| Gap | 22495820-22545830 | 50 | ||
| Defma14-ps | Cen | 22549100-22549350 | 3.6 | |
| vDefcr2,7,18-ps | Cen | 22555539-22556383 | 5.5 | Defa-ps18 |
| ribo L21 | Cen | 22564864-22565148 | 8.5 | |
| CRS1C-1 | Tel | 22565897-22567035 | 0.8 | |
| Zn-MYM | Cen | 22571500-22572000 | 4.5 | |
| Hyb-Defma3-ps | Cen | 22583721-22587169 | 11.5 | Defa-ps17 |
| Defcr20A | Cen | 22619726-22620709 | 32.6 | Defa20 |
| Defcr20B | Cen | 22639500-22640500 | 18.8 | |
| vDefcr2,16-ps | Cen | 22666760-22667760 | 26.3 | |
| Defcr5c | Cen | 22675839-22676823 | 9.1 | |
| Defma15-ps | Cen | 22687050-22687300 | 10.5 | |
| vDefcr2,18 | Cen | 22693497-22694340 | 5.5 | |
| ribo L21 | Cen | 22702812-22703096 | 8.5 | |
| CRS1C-1 | Tel | 22703845-22704983 | 0.8 | |
| Zn-MYM | Cen | 22705159-22709922 | 0.2 | |
| Defcr26 | Cen | 22728653-22729355 | 18.7 | Defa26 |
| Defma16-ps | Cen | 22749500-22749750 | 20.9 | |
| Defcr17 | Cen | 22766205-22767209 | 15.3 | Defa17 |
| Defcr5d | Cen | 22776222-22777206 | 9 | |
| Defma17-ps | Cen | 22799100-22799900 | 22.1 | Defa-ps9 |
| vDefcr18-ps | Cen | 22805444-22806420 | 5.4 | Defa-ps1 |
| CRS1C-3,-6 | Tel | 22812994-22814120 | 6.6 | AY761184 |
| Zn-MYM | Cen | 22818500-22819000 | 4.4 | |
| Hyb-Defma4-ps | Cen | 22832541-22835992 | 13.5 | Defa-ps10 |
| Defcr24 | Cen | 22845007-22845850 | 9 | Defa24 |
| Defma18-ps | Cen | 22859651-22860443 | 13.8 | Defa-ps11 |
| Defb1 | Cen | 22887069-22905658 | 26.6 | |
| NT_166309.1 | ||||
| Defma19-ps | Unk | 110050-111004 | ||
| CRS4C-6 | Unk | 7684-8700 |
a
Cen, centromere; Tel, telomere; Unk, unknown.
b
MGI, Mouse Genome Informatics.