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. 2010 Nov 1;31(2):300–316. doi: 10.1128/MCB.00561-10

FIG. 4.

FIG. 4.

LINE-1 elements expressed in hESC and hEC cell lines. (a to d) Each panel contains a cartoon of all of the cell line chromosomes, according to sex (a, 2102Ep; b, H13B; c, H7; d, H9). Each bar on the chromosome ideogram represents a sequenced transcript produced from a full-length (confirmed or inferred) LINE-1 element. We found that older subfamilies of LINE-1s are able to produce an antisense transcript, and the color of each line corresponds to a different L1 subfamily (green, L1Hs; red, L1PA3; orange, L1PA2; purple, L1PA8; blue, L1PA4; yellow, L1PA5; light blue, L1PA7; light orange, L1P1; purple, L1PA15; light brown, L1PA6). In panels b to d, it is indicated whether the sequence was obtained from a short- or a long-size pool (lines marked with _S_ and _L_, respectively). The chromosome band, if a full-length L1 was annotated in that position, the size of the transcript, and other details can be found in Tables 1 and 2 (for hEC cells and hESCs, respectively).