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. 2010 Nov 17;49(1):335–344. doi: 10.1128/JCM.01142-10

TABLE 5.

Sequence signatures identified for the H1N1 (2009) primer design

Signature target No. of sequences No. of subsequences blind to background No. of unique blind sequences No. of unique sequences conserved across ≥200 sequences (potential signatures) Signature nucleotide length (min/max)
2009 H1N1 segment 4 234 234 73 14 20/38
2009 H1N1 segment 6 314 225 86 28 20/57