TABLE 7.
Genome sequences for gut flora and pathogens used in ThermoBLAST analysis to check primer and probe sequence designs for hybridization that could cause false-positive tests
| GenBank accession no. | Organism |
|---|---|
| NC_003228 | Bacteroides fragilis NCTC 9343 |
| NC_004663 | Bacteroides thetaiotaomicron VPI-5482 |
| NC_009614 | Bacteroides vulgatus |
| NC_008618 | Bifidobacterium adolescentis ATCC 15703 |
| NC_011835 | Bifidobacterium animalis subsp. lactis AD011 |
| NC_012814 | Bifidobacterium animalis subsp. lactis Bl-04 |
| NC_012815 | Bifidobacterium animalis subsp. lactis DSM 10140 |
| NC_004307 | Bifidobacterium longum NCC2705 |
| NC_010816 | Bifidobacterium longum DJO10A complete genome |
| NC_008226 | Clostridium difficile 630 plasmid pCD630 |
| NC_013316 | Clostridium difficile R20291 |
| NC_009778 | Cronobacter sakazakii ATCC BAA-894 chromosome |
| NC_009436 | Enterobacter sp. 638 |
| NC_004668 | Enterococcus faecalis V583 |
| NC_012759 | Escherichia coli BW2952 |
| NC_006814 | Lactobacillus acidophilus NCFM |
| NC_010999 | Lactobacillus casei BL23 |
| NC_010609 | Lactobacillus reuteri JCM 1112 |
| NC_010729 | Porphyromonas gingivalis ATCC 33277 |
| NC_010554 | Proteus mirabilis HI4320 |
| NC_004631 | Salmonella enterica subsp. enterica serovar Typhi strain Ty2 |
| NC_002305 | Salmonella typhi (antibiotic resistance plasmid) |