Table 2.

SNPs With Smallest P Values Identified by Genotyping

SNP	Chromosome	Position (bp)	Minor Allele Frequency		Unadjusted*	Armitage	Adjusted for Eight Eigenvectors*
			Cases	Controls	P	P	OR	95% CI	P	P†
rs7158782	14	95238884	0.189	0.109	3.48E-06	3.34E-06	2.13	1.58 to 2.87	7.74E-07	4.73E-07
rs7159713	14	95239330	0.189	0.109	3.48E-06	3.34E-06	2.13	1.58 to 2.87	7.74E-07	4.73E-07
rs2369049	14	95241604	0.176	0.100	9.17E-06	6.98E-06	2.08	1.54 to 2.83	2.23E-06	1.96E-06
rs4742490	9	8361609	0.375	0.277	4.41E-05	2.79E-05	1.65	1.31 to 2.08	2.04E-05	1.05E-03
rs6637820	23	130227989	0.123	0.062	1.35E-05	8.21E-06	2.28	1.55 to 3.37	2.93E-05	3.61E-05
rs1207405	22	24970849	0.111	0.058	6.84E-05	9.12E-05	2.28	1.54 to 3.38	3.76E-05	4.47E-04
rs17017756	2	79821583	0.140	0.218	1.28E-04	9.99E-05	0.55	0.42 to 0.74	4.97E-05	2.98E-05
rs260964	1	39330359	0.352	0.259	7.97E-05	5.85E-05	1.60	1.27 to 2.01	5.70E-05	8.32E-06
rs409228	3	41040417	0.230	0.321	6.25E-05	5.59E-05	0.61	0.48 to 0.78	5.89E-05	5.44E-05
rs12186280	4	108046724	0.102	0.052	8.87E-05	8.63E-05	2.24	1.51 to 3.32	6.22E-05	3.68E-04
rs6633380	23	13756099	0.296	0.212	1.28E-04	6.63E-05	1.65	1.29 to 2.10	6.88E-05	3.93E-05
rs2515034	8	119565108	0.092	0.044	1.04E-04	7.31E-05	2.34	1.54 to 3.57	8.53E-05	5.04E-04
rs11145462	9	79332930	0.399	0.491	1.80E-04	2.10E-04	0.65	0.53 to 0.81	8.19E-05	1.99E-04
rs4246309	15	98584524	0.447	0.347	6.66E-05	5.07E-05	1.52	1.23 to 1.88	8.81E-05	1.39E-04

Abbreviations: SNP, single nucleotide polymorphism; bp, base pair; OR, odds ratio.

^*Conditional logistic regression.

^†Prior history of fractures and hormone usage.