TABLE 2.

Sequences and genomic position of the primer-probe sets

Viral gene	Genome positiona	Oligonucleotide sense/function	5′-3′ sense nucleotide sequence
H	7315	Forward primer	GAA CAC TCG GGT GGT TCT TAA TAA A
	7426	Reverse primer	TGC GAT AGC TAA TAG CCC GAC
		Probe	ACG GTG TTG TTT GTC ATG T
F	6956	Forward primer	TGA TTG CAG TAG TGG GTA TCC TCA
	7092	Reverse primer	TGA CCG TAC GTA GGA TTT GGA TG
		Probe	ACC TGT TGC TGT AGG AAG
N	1020	Forward primer	TGG GTG AAC TGG CTC C
	1120	Reverse primer	CCC ATA GCA TAG CTC CA
		Probe	TTC AGT GCA GGA GCA
L9	9157	Forward primer	GCAACATACAAACGGCTACCAA
	9303	Reverse primer	TGGCAACCAGCTTGTTAGTCA
		Probe	CTG TAT TTC ACC ATG GAC TC
L10	10376	Forward primer	RAT GAA AGG WCA TGC CAT ATT
	10450	Reverse primer	GGT GGC CAG CTC C
		Probe	ATC ATC AAC GGG TAT CG

^aNumbers indicate the 5′ nucleotide position of the primer-probe, counting from the 5′ end of the full-length genome sequence of RPV, according to Kabete O sequence NC006296.