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. Author manuscript; available in PMC: 2011 Feb 1.
Published in final edited form as: Proteomics. 2010 Feb;10(3):520–531. doi: 10.1002/pmic.200900573

Table 1.

Proteins with significant expression level changes in bronchoalveolar lavage fluid from mice challenged with OVA and OVA plus ultra fine particles

Protein assigned Spot No. Accession Number Mr (kDa) Cal. pI Sequence Coverage (%) Mascot Score Peptides Matched Fold changed (OVA vs. PBS) Fold changed (OVA/UFP vs. PBS)

Haptoglobin 1 HPT_MOUSE 38,7 5.9 10 108 4 +2.49 +3.82
2 22 349 10 -1.78 -3.31

Polymeric-immunoglobulin receptor (Poly-Ig receptor) (PIGR) 3 PIGR_MOUSE 84,9 5.3 19 511 15 +5.77 +6.77

Thioredoxin (Trx) (ATL-derived factor) (ADF) 4 THIO_MOUSE 11,7 4.8 20 64 2 -1.55 -2.81

Coactosin-like protein 5 COTL1_MOUSE 15.9 5.3 21 131 5 +1.88 +3.2

Pulmonary surfactant-associated protein A (SP-A) 6 SFTPA_MOUSE 26,1 5.3 14 173 2 +1.94 +2.52

Ferritin light chain 1 7 FRIL1_MOUSE 20,8 5.7 22 238 4 -1.64 -1.95

Chitinase 3-like protein 4 (Ym2) 8 CH3L4_MOUSE 44,9 5.8 15 155 6 +1.25 +46.29

Transcobalamin-2 9 TCO2_MOUSE 47,6 5.9 12 202 6 +1.23 +1.68

Plasminogen 10 PLMN_MOUSE 90,7 6.2 1 290 11 -1.88 -1.42

Neutrophil gelatinase-associated lipocalin (NGAL) 11 NGAL_MOUSE 22,9 9.0 13 132 9 +5.24 +5.50
12 13 76 6 +5.69 +5.25

Chitinase-3-like protein 1 (Cartilage glycoprotein 39) (GP-39) 13 CH3L1_MOUSE 43 8.7 27 348 24 +1.44 +1.89

Complement C3 (HSE-MSF) 14 CO3_MOUSE 186,4 6.4 5 203 13 +3.79 +4.78
15 11 224 19 +2.70 +4.00
16 4 173 7 +37.61 +83.33
17 5 402 10 +6.35 +13.95
18 5 146 6 +5.33 +6.95

Acidic mammalian chitinase 19 CHIA_MOUSE 52 4.9 18 250 15 +1.39 +4.96
20 1 49 1 +1.72 +4.8

Serum albumin 21 ALBU_MOUSE 68,6 5.8 9 124 5 +8.97 +17.04
22 15 224 11 +1.49 +4.14

Chitinase 3-like protein 3 (Ym1) 23 CH3L3_MOUSE 44,4 5.4 25 274 13 +1.49 +4.38
24 27 282 14 +5.89 +20.15
25 22 159 9 +6.32 +26.72
26 30 368 22 +2.34 +5.27

Pulmonary surfactant-associated protein D (PSP-D) 27 SFTPD_MOUSE 37,7 7.6 30 234 10 +3.48 +7.35
28 13 99 4 +5.04 +13.36
29 18 250 9 +2.60 +4.27
30 18 243 9 +5.99 +21.94