Table 1. Basic information of seventeen microorganisms' genome.
Lactobacillus delbrueckii subsp. Bulgaricus | accession | genome size (bp) | GC_bp | intact ORFs | truncated ORFs | all genes | ORFLen | ORFLen Avg | CG content | CG bp in gene | CG content in gene | GC3 content % |
LBU_2038 | CP000156 | 1,872,907 | 930,460 | 1,661 | 129 | 1,790 | 1,537,377 | 859 | 49.68% | 793116 | 51.59% | 64.73% |
ATCC 11842 | NC_008054 | 1,864,998 | 927,259 | 1,562 | 270 | 1,832 | 1,370,460 | 877 | 49.72% | 707387 | 51.62% | 64.86% |
ATCC BAA-365 | NC_008529 | 1,856,951 | 922,651 | 1,647 | 74 | 1,721 | 1,432,908 | 833 | 49.69% | 737965 | 51.50% | 64.69% |
All genomes in the table were obtained from the NCBI database, except sequenced Lb. bulgaricus 2038. GC3 reflects the GC content at the third site of each codon.