Table 3.

Summary of all QTL pairs detected using pair-wise scans in the F2 mice.

	QTL 1			QTL 2			LOD			%
Trait	Chr	Best location (cM)	Closest marker to peak LOD	Chr	Best location (cM)	Closest marker to peak LOD	Full	Add	Int
Glu 12 wk	15	53.7	D15Mit2	19	27	D19Mit30	10.4	3.6	6.8	8.5
	5	36	D5Mit80	7	28.7	D7Mit231	9.3	2.9	6.4	6.5
	12	53	D12Mit233	19	28	D19Mit30	9.3	2.8	6.5	5.8
Tg 16 wk	3	21.6	D3Mit304	13	38	D13Mit26	12.3	2.1	10.2	4.8
Tg 20 wk	7	79.7	D7Mit109	14	59.5	D14Mit102	11.7	1.3	10.4	4.8
	10	24	D10Mit130	17	75	D17Mit123	10.8	2.8	8.1	5.0
	5	99	D5Mit101	16	51.3	D16Mit152	11.1	0.9	10.2	3.1
Chol 8 wk	5	33	D5Mit80	17	30	D17Mit54	12.9	2.1	10.8	4.8
	5	107	D5Mit101	14	57.5	D14Mit107	9.3	1.9	7.4	4.0
Chol 24 wk	1	68.7	D1Mit26	10	50	D10Mit11	13.4	5.8	7.6	7.5
	15	45.7	D5Mit2	16	57.3	D16Mit152	10.5	2.0	8.6	4.2
	4	14.3	D4Mit97	5	98	D5Mit101	13.6	1.8	11.8	3.7
IG FPW	7	82.7	D7Mit109	8	52	D8Mit242	9.9	3.0	6.9	3.7
Sum FPW	7	71.7	D7Mit109	17	76	D17Mit123	9.8	2.7	7.1	3.9

Chr, chromosome; Full, the Lod score for the full model (including additive effects and interaction); Add, the Lod score for two locus additive effects; Int, the Lod score for the interaction (Full - Add); %, total variance explained by R-square; Glu, glucose; Tg, trighlyceride; Chol, cholesterol; IG FPW, inguinal fat pad weight; Sum FPW, sum of the 5 regional fat pad weights; wk, week.