Table 3.
Differentially regulated AP2/ERF genes during ripening in the flesh tissues.
| Genes up-regulated in the transition from veraison to ripe in the flesh tissues | Genes down-regulated in the transition from veraison to ripe in the flesh tissues | ||||||
|---|---|---|---|---|---|---|---|
| Name | Fold Change (log2) | S.D. | Family-Group | Name | Fold Change (log2) | S.D. | Family-Group |
| VvERF046 | 6.46 | 0.65 | ERF-V | VvERF114 | -14.37 | ERF-X | |
| VvERF118 | 5.31 | 1.87 | ERF-X | VvERF146 | -7.94 | RAV | |
| VvERF047 | 5.2 | 0.64 | ERF-V | VvERF100 | -7.3 | ERF-IX | |
| VvERF027 | 4.69 | ERF-III | VvERF107 | -6.48 | ERF-IX | ||
| VvERF053 | 4.5 | 3.5 | ERF-VI | VvAP2-1 | -6.07 | AP2 | |
| VvERF072 | 4.27 | 1.61 | ERF-IX | VvERF099 | -5.85 | 5.29 | ERF-IX |
| VvERF071 | 4.14 | 1.66 | ERF-IX | VvERF085 | -5.64 | 2.69 | ERF-IX |
| VvERF023 | 4 | 0.81 | ERF-III | VvERF106 | -5.23 | 0.89 | ERF-IX |
| VvERF092 | 3.45 | 1.88 | ERF-IX | VvAP2-5 | -4.9 | AP2 | |
| VvAP2-13 | 3.35 | 1.35 | AP2 | VvERF097 | -4.71 | ERF-IX | |
| VvERF095 | 3.13 | 1.09 | ERF-IX | VvERF010 | -4.64 | 2.29 | ERF-II |
| VvAP2-8 | 3.13 | 0.39 | AP2 | VvERF029 | -4.54 | 4.02 | ERF-III |
| VvAP2-3 | 3.05 | AP2 | VvERF022 | -4.44 | 1.46 | ERF-III | |
| VvERF094 | 2.81 | 1.81 | ERF-IX | VvERF111 | -3.96 | 0.03 | ERF-IX |
| VvERF103 | 2.56 | ERF-IX | VvAP2-17 | -3.83 | 1.85 | AP2 | |
| VvERF045 | 2.47 | 2.23 | ERF-V | VvAP2-16 | -3.53 | AP2 | |
| VvERF006 | 2.45 | 1.35 | ERF-II | VvERF020 | -3.51 | ERF-III | |
| VvAP2-12 | 2.3 | 1.74 | AP2 | VvERF054 | -3.49 | 0.08 | ERF-VI |
| VvERF087 | -3.49 | ERF-IX | |||||
| VvERF079 | -3.25 | 2.53 | ERF-IX | ||||
| VvERF096 | -3.16 | 2.47 | ERF-IX | ||||
| VvERF016 | -3.13 | 2.01 | ERF-III | ||||
| VvERF05 | -3.12 | 2.4 | ERF-I | ||||
| VvERF122 | -3 | 1.09 | ERF-6-L | ||||
| VvERF117 | -2.81 | 0.6 | ERF-X | ||||
| VvERF024 | -2.42 | 1.07 | ERF-III | ||||
| VvERF040 | -2.38 | 0.41 | ERF-IV | ||||
| VvERF051 | -2.34 | 0.96 | ERF-V | ||||
| VvERF098 | -2.21 | 1.47 | ERF-IX | ||||
| VvERF018 | -2.09 | ERF-III | |||||
Relative mRNA levels ERF, AP2 and RAV members up- or down-regulated in the flesh tissues of the grapevine berry during transition from the veraison stage to full ripeness, quantified by RT-qPCR, according to the 2-ΔΔCt method. The results shown are from at least three independent replicates. Expression values for which a standard deviation (SD) is not provided, correspond to samples that did not reach the selected threshold fluorescence level before the 39th cycle in one of the two ripening stages.