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. 2010 Dec 30;11:730. doi: 10.1186/1471-2164-11-730

Table 1.

Functional classification of differentially expressed genes associated with enriched GO terms1

GO components Gene number3 P value2 Depth
A. Biological process
 lipid transport GO:0006869 7 3.61E-07 3
 lipid localization GO:0010876 7 3.61E-07 3
 response to stress GO:0006950 12 2.33E-05 2
 carbohydrate metabolic process GO:0005975 11 6.38E-04 3
 macromolecule localization GO:0033036 7 1.91E-03 2
 regulation of transcription, DNA-dependent GO:0006355 8 4.07E-03 5
 regulation of RNA metabolic process GO:0051252 8 4.17E-03 4
 transcription, DNA-dependent GO:0006351 8 5.69E-03 5
 RNA biosynthetic process GO:0032774 8 5.69E-03 4
 primary metabolic process GO:0044238 39 6.51E-03 2
B. Molecular function
 hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004553 7 8.41E-04 4
 oxidoreductase activity GO:0016491 20 4.41E-03 2

1Differentially expressed genes with fold change of > = 2 are classified here.

2P values were calculated using Fisher's exact test.

3Only groups with more than 5 genes/transcripts were listed here.