Table 1.
Annotations and period | Source | First structures | Structures | % first | ||
---|---|---|---|---|---|---|
total | nr | total | nr | |||
GO terms during PSI | MCSG | 45 | 1165 | 1110 | 3.86 | 4.05 |
JCSG | 33 | 987 | 938 | 3.34 | 3.52 | |
NESG | 23 | 808 | 720 | 2.85 | 3.19 | |
NYSGXRC | 35 | 883 | 789 | 3.96 | 4.44 | |
PSI | 153 | 4101 | 3711 | 3.73 | 4.12 | |
Non-PSI | 1677 | 49373 | 22192 | 3.40 | 7.56 | |
GO terms during PSI-1 | MCSG | 25 | 274 | 265 | 9.12 | 9.43 |
JCSG | 18 | 181 | 169 | 9.94 | 10.65 | |
NESG | 15 | 178 | 170 | 8.43 | 8.82 | |
NYSGXRC | 19 | 187 | 169 | 10.16 | 11.24 | |
PSI | 82 | 872 | 811 | 9.40 | 10.11 | |
Non-PSI | 1189 | 20803 | 10319 | 5.72 | 11.52 | |
GO terms during PSI-2 | MCSG | 20 | 891 | 852 | 2.24 | 2.35 |
JCSG | 15 | 806 | 772 | 1.86 | 1.94 | |
NESG | 8 | 630 | 558 | 1.27 | 1.43 | |
NYSGXRC | 16 | 696 | 624 | 2.30 | 2.56 | |
PSI | 71 | 3229 | 2964 | 2.20 | 2.40 | |
Non-PSI | 488 | 28570 | 14975 | 1.57 | 3.26 | |
Pfam families during PSI | MCSG | 241 | 1165 | 1110 | 20.69 | 21.71 |
JCSG | 133 | 987 | 938 | 13.48 | 14.18 | |
NESG | 197 | 808 | 720 | 24.38 | 27.36 | |
NYSGXRC | 131 | 883 | 789 | 14.84 | 16.60 | |
PSI | 726 | 4101 | 3711 | 17.70 | 19.56 | |
Non-PSI | 3028 | 49373 | 22192 | 6.13 | 13.64 | |
Pfam families during PSI-1 | MCSG | 108 | 274 | 265 | 39.42 | 40.75 |
JCSG | 36 | 181 | 169 | 19.89 | 21.30 | |
NESG | 69 | 178 | 170 | 38.76 | 40.59 | |
NYSGXRC | 35 | 187 | 169 | 18.72 | 20.71 | |
PSI | 260 | 872 | 811 | 29.82 | 32.06 | |
Non-PSI | 2069 | 20803 | 10319 | 9.95 | 20.05 | |
Pfam families during PSI-2 | MCSG | 133 | 891 | 852 | 14.93 | 15.61 |
JCSG | 97 | 806 | 772 | 12.03 | 12.56 | |
NESG | 128 | 630 | 558 | 20.32 | 22.94 | |
NYSGXRC | 96 | 696 | 624 | 13.79 | 15.38 | |
PSI | 466 | 3229 | 2964 | 14.43 | 15.72 | |
Non-PSI | 959 | 28570 | 14975 | 3.36 | 6.40 |
Numbers of first structures and their percentage of total structures and non-redundant (nr) structures at 95% sequence identity for molecular function GO terms and Pfam families during PSI, PSI-1, and PSI-2.