Table 4. Obesity susceptibility loci identified in GWAS tested by linear regression for association with BMI in 395 women with PCOS.
ADDITIVE | DOMINANT | RECESSIVE | ||||||||||||
Gene | SNP | Minor allele | N | BETA | STAT | P | N | BETA | STAT | P | N | BETA | STAT | P |
FTO | rs1421085 | C | 395 | 0.049 | 2.521 | 0.012 | 395 | 0.040 | 1.391 | 0.165 | 395 | 0.101 | 2.876 | 0.004 |
rs17817449 | G | 395 | 0.043 | 2.188 | 0.029 | 395 | 0.033 | 1.148 | 0.252 | 395 | 0.092 | 2.569 | 0.011 | |
rs8050136 | A | 395 | 0.046 | 2.362 | 0.019 | 395 | 0.038 | 1.312 | 0.190 | 395 | 0.095 | 2.684 | 0.008 | |
rs9939609 | A | 395 | 0.047 | 2.412 | 0.016 | 395 | 0.040 | 1.385 | 0.167 | 395 | 0.095 | 2.684 | 0.008 | |
rs9930506 | G | 395 | 0.024 | 1.227 | 0.221 | 395 | 0.014 | 0.485 | 0.628 | 395 | 0.056 | 1.606 | 0.109 | |
GNPDA2 | rs10938397 | G | 395 | 0.034 | 1.726 | 0.085 | 395 | 0.056 | 1.894 | 0.059 | 395 | 0.028 | 0.843 | 0.400 |
KCTD15 | rs11084753 | A | 394 | −0.014 | −0.666 | 0.506 | 394 | −0.030 | −1.112 | 0.267 | 394 | 0.013 | 0.319 | 0.750 |
MC4R | rs17782313 | C | 395 | 0.026 | 1.155 | 0.249 | 395 | 0.024 | 0.887 | 0.376 | 395 | 0.064 | 1.108 | 0.268 |
rs12970134 | A | 395 | 0.041 | 1.940 | 0.053 | 395 | 0.031 | 1.152 | 0.250 | 395 | 0.118 | 2.428 | 0.016 | |
MTCH2 | rs10838738 | G | 395 | 0.005 | 0.239 | 0.811 | 395 | 0.021 | 0.762 | 0.447 | 395 | −0.025 | −0.625 | 0.532 |
NEGR1 | rs2815752 | G | 395 | −0.024 | −1.187 | 0.236 | 395 | −0.006 | −0.225 | 0.823 | 395 | −0.082 | −2.069 | 0.039 |
SH2B1 | rs7498665 | G | 395 | 0.007 | 0.343 | 0.732 | 395 | 0.016 | 0.568 | 0.570 | 395 | −0.005 | −0.124 | 0.901 |
TMEM18 | rs6548238 | T | 395 | 0.019 | 0.773 | 0.440 | 395 | 0.009 | 0.309 | 0.758 | 395 | 0.117 | 1.542 | 0.124 |