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Comparison of different identification methods on the original PPI networks (MYP) and the best extended networks (MYPT2)
| parameter | MYPT2 | MYP | |||||
|---|---|---|---|---|---|---|---|
| #modules | AVG -log(p-value) | Coverage | #modules | AVG -log(p-value) | Coverage | ||
| MCL | r = 1.4 | 271 | 7.8696 | 0.95249 | 327 | 5.44644 | 0.95623 |
| MCODE | t = 0.2 | 95 | 11.78031 | 0.26683 | 60 | 8.23775 | 0.10493 |
| NG | s = 4200 | 279 | 7.65399 | 0.79388 | 292 | 5.21413 | 0.81588 |
| HCcc | k = 350 | 195 | 7.12497 | 0.92719 | 173 | 4.1128 | 0.87769 |
| HCnb | k = 350 | 224 | 6.65543 | 0.96706 | 173 | 4.0578 | 0.86120 |
