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. 2010 Dec 14;11(Suppl 11):S2. doi: 10.1186/1471-2105-11-S11-S2

Table 3.

Computational speed.

Steps 3DZD CE
Preprocessing Surface generation 1.42 (seconds) -
Voxelization 3.70 -
Computing descriptor 7.83 -

Pair-wise comparison 1.46 x 10-4 2.66
PDB database scan a) 9.36 1 day 23 hours 36 minutes

The values are averaged over the 2337 proteins. a) Times for the search against 64098 proteins.