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. 2011 Jan 10;12:11. doi: 10.1186/1471-2105-12-11

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Copyright © 2011 Linard et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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OrthoInspector Suite overview. OrthoInspector provides two user interfaces: a command-line client and a graphical interface. Installation operations include the creation of the database, the calculation of ortholog/inparalog groups and an optional creation of pre-calculated data. Queries include orthologous relationship searches, with or without advanced criteria: textual searches access results trough sequence accession numbers or sequence descriptions, batch queries allow submitting of multiple sequences in FASTA format and constraints of presence/absence of orthologs in specific organisms can be considered. Visualization tools provide different views for comparative studies.