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. Author manuscript; available in PMC: 2011 Jan 21.
Published in final edited form as: Methods Mol Biol. 2010;627:75–90. doi: 10.1007/978-1-60761-670-2_4
Command Explanation
DEFINE APROG galpha //a unique name for this block
PARAM %position //defines ‘position’ is the only variable
FLOW 20 //sets the flow rate (units μl/min)
FLOWPATH 1,2,3,4 //can be modified to inject only two flow cells
KINJECT %position 200 300 //performs a stabilized injection, 200 μl volume and 300 sec dissociation time
END
DEFINE APROG loadGST //specifies what to load to sensor chip surface
FLOW 5
FLOWPATH 1,2 //specifies flow cells to load
INJECT R2F3 15 //specifies position to retrieve GST from stock tube and amount (in μl)
EXTRACLEAN
END
DEFINE APROG loadGSTfusion //specifies what to load to sensor chip
FLOW 5
FLOWPATH 3,4
INJECT R2F4 20 //specifies position to retrieve GST-fusion protein and amount (in μl)
EXTRACLEAN
END
DEFINE APROG glycine //specifies removal of GST/GST-fusion from antibody surface
FLOW 20
FLOWPATH 1,2,3,4
INJECT R2F6 40
EXTRACLEAN
END
MAIN
RACK 1 THERMO_C //specifies which thermal block is to be found in the rack positions
RACK 2 THERMO_A
RACK R Reag_A
DETECTION 1,2,3,4
APROG loadGST //loads a GST control
APROG loadGSTfusion //loads the experiment
APROG galpha R2A1 //injection of 200 μl of the sample in rack position R2A1
APROG glycine //regenerates the binding surface
APPEND Standby //puts the machine in standby mode
END