Table 5.
Characterization of the CRISPR loci of S. islandicus REY15A (family I) after challenging with constructs carrying protospacers matching spacers within locus 1 and/or 2 (Fig. 2).
| CRISPR locus deletion | ||||
|---|---|---|---|---|
| Experiment | CRISPR locus/spacer (+CC motif) | Transformation efficiency [cfu (µg DNA)−1] | PCR estimate (kb) | Sequencing result |
| 1 | L2/45 + L1/20 | 4 | > 17 kb (3×) | L1 + L2 (×2) |
| 2 | L1/1 | 6 | 64 bp (2×) | r1–r2 (×2) |
| 0.2 and 5 | Leader–r3 and r1–r80 | |||
Each construct was tested twice and transformation efficiencies were averaged. L1 + L2 indicates that both CRISPR loci are deleted, and r1–r2 shows that recombination had occurred between repeats 1 and 2 with the resultant deletion of spacer 1 and one repeat.