Table 4.
Gene set enrichment in genes with suboptimal context of sAUG in human
| Category | Term | Count | % | P-value |
|---|---|---|---|---|
| PIR_SUPERFAMILY | PIRSF003152:G protein-coupled olfactory receptor, class II | 41 | 3.17 | 8.43E-08 |
| KEGG_PATHWAY | hsa04740:Olfactory transduction | 46 | 3.55 | 1.78E-07 |
| UP_SEQ_FEATURE | splice variant | 555 | 42.86 | 3.16E-07 |
| SP_PIR_KEYWORDS | alternative splicing | 555 | 42.86 | 9.02E-07 |
| INTERPRO | IPR000725:Olfactory receptor | 47 | 3.63 | 1.27E-06 |
| GOTERM_MF_FAT | GO:0004984∼olfactory receptor activity | 47 | 3.63 | 1.32E-06 |
| GOTERM_BP_FAT | GO:0007608∼sensory perception of smell | 48 | 3.71 | 1.51E-06 |
| GOTERM_BP_FAT | GO:0051252∼regulation of RNA metabolic process | 150 | 11.58 | 3.55E-06 |
| GOTERM_BP_FAT | GO:0045449∼regulation of transcription | 205 | 15.83 | 3.64E-06 |
| GOTERM_BP_FAT | GO:0006355∼regulation of transcription, DNA-dependent | 147 | 11.35 | 3.87E-06 |
| GOTERM_BP_FAT | GO:0006350∼transcription | 172 | 13.28 | 4.56E-06 |
| GOTERM_BP_FAT | GO:0007606∼sensory perception of chemical stimulus | 50 | 3.86 | 5.67E-06 |
| UP_SEQ_FEATURE | compositionally biased region:Poly-Pro | 50 | 3.86 | 8.67E-06 |
| GOTERM_MF_FAT | GO:0043565∼sequence-specific DNA binding | 61 | 4.71 | 2.56E-05 |
| SP_PIR_KEYWORDS | olfaction | 46 | 3.55 | 2.86E-05 |
All considered genes were used as the background set.
Fifteen categories with the lowest P-values are listed.