Table 2.
Haplotype details for the core set of starch biosynthesis/degradation genes.
| EST | BLAST search result | Number of haplotypes | SNPs | InDels | Approx. sequence length (bp) |
|---|---|---|---|---|---|
| HY09D18 | Sucrose synthase 1 | 5 | 18 | 1 | 360 |
| HF08A21 | Sucrose synthase 2 | 7 | 14 | 550 | |
| HA31O14 | Sucrose synthase 2 | 5 | 4 | 750 | |
| HF21A17 | Hexokinase | 5 | 4 | 350 | |
| HY04O18 | ADP-glucose pyrophosphorylase large subunit | 5 | 4 | 350 | |
| HB16O10 | ADP-glucose pyrophosphorylase small subunit (alternatively spliced) | 4 | 5 | 1050 | |
| HA31F12 | ADP-glucose pyrophosphorylase small subunit | 3 | 2 | 1000 | |
| HB05N09 | Starch synthase I | 2 | 1 | 1 | 900 |
| HF05C15 | Starch synthase IV | 4 | 9 | 650 | |
| HY09J12 | Granule-bound starch synthase 1b | 4 | 5 | 350 | |
| HB30O07 | Starch branching enzyme I | 10 | 45 | 8 | 550 |
| HB21K16 | Starch branching enzyme IIa | 2 | 1 | 550 | |
| HZ53C02 | Beta-amylase | 3 | 2 | 450 | |
| HF17A10 | Beta amylase | 4 | 3 | 1 | 280 |
| HF11O03 | Sd 1 beta-amylase | 5 | 5 | 280 | |
| HZ60P11 | Alpha glucosidase | 4 | 35 | 3 | 1800 |
| HB20O07 | Gamma 2 hordein | 6 | 9 | 300 | |
| Σ | 78 | 166 | 14 | ||