Table 1.
Protein products of genes classified as highly expressed (PHX) and moderately highly expressed (PX) according to codon usage.
| Gen name* | length (bp) | Product | G+C desviation (SD) | N of HIP1 motifs |
|---|---|---|---|---|
| Synpcc7942_0260 | 824 | ATPase | 0 | 3 |
| Synpcc7942_0442 | 497 | ammonium transporter | 0 | 1 |
| Synpcc7942_0656 | 461 | photosystem II 44 kDa subunit reaction center protein | 0 | 0 |
| Synpcc7942_0697 | 508 | photosystem II core light harvesting protein | 0 | 1 |
| Synpcc7942_0885 | 694 | elongation factor G | 0 | 1 |
| Synpcc7942_0977 | 333 | Phosphoribulokinase | 0 | 0 |
| Synpcc7942_1096 | 456 | thiamine biosynthesis protein ThiC | 0 | 1 |
| Synpcc7942_1231 | 324 | apocytochrome f | 0 | 0 |
| Synpcc7942_2048 | 734 | photosystem I P700 chlorophyll a apoprotein A2 | 0 | 2 |
| Synpcc7942_2049 | 763 | photosystem I P700 chlorophyll a apoprotein A1 | 0 | 1 |
| Synpcc7942_2463 | 417 | S-adenosylmethionine synthetase | 0 | 0 |
| Synpcc7942_2468 | 634 | molecular chaperone DnaK | 0 | 0 |
| Synpcc7942_0143 | 326 | pyruvate/2-oxoglutarate dehydrogenase (E1) component | 0 | 0 |
| Synpcc7942_0169 | 723 | glutamate-ammonia ligase, glutamine synthetase type III | 0 | 2 |
| Synpcc7942_0282 | 427 | serine hydroxymethyltransferase | 0 | 1 |
| Synpcc7942_0297 | 613 | FtsH peptidase | 0 | 2 |
| Synpcc7942_0328 | 705 | phycobilisome core-membrane linker polypeptide | 0 | 1 |
| Synpcc7942_0336 | 505 | F0F1 ATP synthase subunit alpha | 0 | 2 |
| Synpcc7942_0385 | 457 | geranylgeranyl reductase | 0 | 2 |
| Synpcc7942_0424 | 360 | photosystem q(b) protein | 0 | 0 |
| Synpcc7942_0479 | 604 | GTP-binding protein LepA | 0 | 3 |
| Synpcc7942_0538 | 668 | Transketolase | 0 | 3 |
| Synpcc7942_0645 | 453 | glutamate-1-semialdehyde aminotransferase | 0 | 1 |
| Synpcc7942_0685 | 555 | chaperonin GroEL | 0 | 2 |
| Synpcc7942_0694 | 307 | 30S ribosomal protein S1 | 0 | 0 |
| Synpcc7942_0734 | 624 | hypothetical protein | 0 | 2 |
| Synpcc7942_0884 | 409 | elongation factor Tu | 0 | 1 |
| Synpcc7942_0942 | 630 | FtsH peptidase | 0 | 1 |
| Synpcc7942_0978 | 403 | ferredoxin-NADP oxidoreductase | 0 | 0 |
| Synpcc7942_1426 | 472 | ribulose bisophosphate carboxylase | 0 | 2 |
| Synpcc7942_1439 | 533 | NAD(P)H-quinone oxidoreductase subunit 4 | 0 | 0 |
| Synpcc7942_1443 | 357 | fructose-1,6-bisphosphate aldolase | 0 | 0 |
| Synpcc7942_1463 | 543 | Porin | 0 | 1 |
| Synpcc7942_1464 | 531 | Porin | 0 | 0 |
| Synpcc7942_1522 | 1100 | DNA-directed RNA polymerase subunit beta | 0 | 1 |
| Synpcc7942_1523 | 624 | DNA-directed RNA polymerase subunit gamma | 0 | 0 |
| Synpcc7942_1524 | 1318 | DNA-directed RNA polymerase subunit beta' | 0 | 4 |
| Synpcc7942_1525 | 597 | GTP-binding protein TypA | 0 | 1 |
| Synpcc7942_1607 | 518 | porin; major outer membrane protein | 0 | 1 |
| Synpcc7942_1719 | 475 | isocitrate dehydrogenase | 0 | 2 |
| Synpcc7942_1782 | 430 | threonine synthase | 0 | 1 |
| Synpcc7942_1907 | 358 | magnesium-protoporphyrin IX monomethyl ester cyclase | 0 | 0 |
| Synpcc7942_2091 | 612 | NAD(P)H-quinone oxidoreductase subunit F | 0 | 5 |
| Synpcc7942_2093 | 430 | CO2 hydration protein | 0 | 1 |
| Synpcc7942_2156 | 473 | L-glutamine synthetase | 0 | 1 |
| Synpcc7942_2160 | 384 | alanine-glyoxylate aminotransferase | 0 | 0 |
| Synpcc7942_2313 | 544 | chaperonin GroEL | 0 | 1 |
| Synpcc7942_2315 | 484 | F0F1 ATP synthase subunit beta | 0 | 1 |
| Synpcc7942_2444 | 337 | phosphate binding protein | 0 | 0 |
| Synpcc7942_2524 | 474 | trigger factor | 0 | 2 |
*PHX genes are shown in black, PX otherwise.