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. 2010 Oct 7;11(Suppl 6):S7. doi: 10.1186/1471-2105-11-S6-S7

Table 4.

Data Generation Protocols

cDNA Sequence Length Open Reading Frame (ORF) Stop Codon Toleration
EXON_KB Whole Length Annotated ORF Only Not Tolerated
E_E_KB ≤ 240 bp Annotated ORF Only Not Tolerated
E_I_TH ≤ 240 bp All 3 ORFs In 3’ end segment
I_E_TH ≤ 240 bp All 3 ORFs Not Tolerated
E_E_TH ≤ 240 bp All 3 ORFs In 3’ end segment

We limited the lengths of the combination transcripts to 240 bp, with a flanking sequence of 120 bp on each side of the splice site.