Table 4.
Summary of MAS NMR-based torsion angles in GNNQQNY fibrils. The data include data determined from TALOS chemical shift analysis (Table 2), chemical shift index analysis and Ψ torsion angles determined via NCCN torsion angle measurements
| residue | Fibril conformer 1 | Fibril conformer 2 | Fibril conformer 3 | |||
|---|---|---|---|---|---|---|
| ϕ | ψ | ϕ | ψ | ϕ | ψ | |
| G7 | n/a | 166 ±10 | n/a | 166 ±20 | n/a | 180 ± 13 |
| N8 | −108 ±20 | 145 ±20 | 54 ±6a) | 40 ±13a) | −119 ±18 | 131 ±12 |
| N9 | −101 ±11 | 136 ± 18 | −88 ±22 | 150 ±13 | −116 ±19 | 130 ± 12 |
| Q10 | −131 ±14 | 130 ±15 | −142 ±13 | 135 ±15 | −146 ±15 | 121 ±20 |
| Q11 | −150 ±12 | 136 ±15 | −129 ±22 | 132 ±11 | −145 ±12 | 153 ±9 |
| N12 b) | β | β | β | β | β | β |
While both TALOS and NCCN analysis favor the listed torsion angles, there appears to be a secondary minimum with β-sheet-like torsion angles (ϕ~ −80°; ψ~ 117°) that may also be consistent with our experimental data (ref. Figure S9 in the SI and main text below).
Results for N12 reflect the secondary structure identified by CSI analysis (figure S4 in SI).