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. 2010 Nov 29;77(3):1101–1106. doi: 10.1128/AEM.01481-10

TABLE 2.

Phylogenetic diversity reached by chitinase and 16S rRNA gene sequences included in habitats used for phylogenetic analyses and expected maximal phylogenetic diversity for the respective habitatsa

Habitat Diversity of:
Chitinase genes
16S rRNA genes
PDreached PDmax % coverage PDreached PDmax % coverage
Freshwater 7.17 7.84 91.5 551.77 866.04 63.7
Tropics 19.64 22.96 85.5 1372.38 1452.78 94.5
Nontropics 25.78 27.79 92.7 1468.50 1730.13 84.9
Coastal 17.77 20.73 85.7 1468.00 1678.59 87.5
Open ocean 27.14 28.50 95.2 1500.22 1628.94 92.1
Hypersaline 9.27 29.96 30.9 553.65 783.61 70.7
Marine 33.82 34.90 96.9 2123.14 2271.65 93.5
Estuarine 14.40 26.31 54.7 984.32 1778.76 55.3
Caribbean Sea 7.10 9.29 76.4 631.05 795.40 79.3
Galapagos Islands 18.39 21.50 85.5 1059.67 1244.79 85.1
Indian Ocean 15.99 22.05 72.5 1023.01 1189.59 86.0
North American East Coast 14.54 23.44 62.0 830.96 1093.74 76.0
Sargasso Sea 18.78 21.52 87.3 854.53 1130 75.6
a

PD, phylogenetic diversity; PDreached, phylogenetic diversity reached; PDmax, expected maximal PD. PDmax values were obtained by the extrapolation of PD rarefaction curves. The coverage was estimated as the fraction of PDreached to PDmax.