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. 2010 Dec 3;77(3):1009–1020. doi: 10.1128/AEM.01696-10

TABLE 2.

Oligonucleotides used in this study

Use and oligonucleotide Sequence (5′-3′)a Location
qRT-PCR
    L-0004 ATACACGAAGAAGAAGGTGTTTCAG Internal region within plu0004
    R-0004 TACCTGTCTGTTCAGTTTCTCCAAC Internal region within plu0004
    L-0157 ATGAAGAGCTGATTGTCGATGATG Internal region within plu0157
    R-0157 CGTAAAAGAGAAAGATAGAGCAGCAC Internal region within plu0157
    L-0183 AGTGTGGAACGTTGGATAGATAGAG Internal region within plu0183
    R-0183 AAGTATAGCTGCACCTACAGAACAAC Internal region within plu0183
    L-1537 ACTTATCCAGGATTCTATTCGTCTG Internal region within plu1537
    R-1537 ACTATAGATTTCGCCTTTGCTATCC Internal region within plu1537
    L-1752 CCTACGATATAGGCAATGGTATCAG Internal region within plu1752
    R-1752 ACAATATCTTGGTAGCCGAAAGAG Internal region within plu1752
    L-1956 GTACCTGTTTGAACAGACTGAAATG Internal region within plu1956
    R-1956 TTGTAGTTACTGAATGCTGACTGTG Internal region within plu1956
    L-1991 GCTAATATTTCCGTAGGCTCTCATC Internal region within plu1991
    R-1991 GGACGTAATCAAAGTGTAATTCTCG Internal region within plu1991
    L-2442 AATAGGCAATATGCTGTACGTCTTC Internal region within plu2442
    R-2442 CAGACCGCAAATACAATAAAGTAGG Internal region within plu2442
    L-3506 TTAAGGGCGATATTGATGTAGAAGG Internal region within plu3506
    R-3506 TTGATAGACATACTGCTGCAACGAC Internal region within plu3506
    L-4092 GACAGTGACCATGAACAGACATAAC Internal region within plu4092
    R-4092 ATATTGGGTTGCTGGTTTAGAGAG Internal region within plu4092
    L-4546 CTGCCGATATAATTGCAGCTTTAC Internal region within plu4546
    R-4546 CCAAATTTCTGAAGGGTGTATTTCC Internal region within plu4546
Plasmid constructions
    XhoI-L-plu1537 GCGCCTCGAGTTAAAATCAATCACAAGAGG Upstream of plu1537
    PstI-R-plu1537 GCGCCTGCAGAATATCTTCTCACAGGAATGG Downstream of plu1537
    XhoI-L-plu4093 GCGCCTCGAGTTAATGAGGAAAATAAATATGTC Upstream of plu4093
    PstI-R-plu4092 GCGCCTGCAGCTACGTACATAAAATATACTTGTTAAA Downstream of plu4092
    XhoI-L-plu2444 GCGCCTCGAGGAGGCCGATAGCTTCCAAC Upstream of plu2444
    PstI-R-plu2441 GCGCCTGCAGAAAGCGTAGCAATGTTCCTG Downstream of plu2441
a

Restriction enzyme sites are underlined.