TABLE 1.
Genea | GenBank accession no. | Primer sequence (5′→3′) | Product size (bp) | Product Tmb |
---|---|---|---|---|
HPRT | NM_001003357 | CGC TGA GGA TTT GGA AAA AG | 150 | 82.5 |
AAT CCA GCA GGT CAG CAA AG | ||||
TNF-α | NM_001003244 | TGC CTG CTG CAC TTT GG | 125 | 84.0 |
GCT ACT GGC TTG TCA CTT GG | ||||
MMP-1 | XM_546546 | CGC GTA AAT CCC TTC TAT CC | 157 | 80.5 |
CAT CCT GAC CCT GAA CAA CC | ||||
MMP-2 | XM_535300 | TGG AGC AAG AAC AAG AAG ACC | 182 | 82.0 + 85.5 |
CCC TTG AAG AAG TAG CTA TGA CC | ||||
MMP-3 | NM_001002967 | ACA CCA GCT GCA TGT GAC C | 123 | 82.0 |
GAA CCC AGG TTC AAG TGT CC | ||||
HS3ST3A1 | XM_546631 | TCA TCG GCG TGA AGA AGG | 200 | 91.0 |
GCG GGT GAC AAA GTA ACT GG | ||||
IL-1β | NM_001037971 | CAG GAC ATA AGC CAC AAA TAC C | 109 | 80.0 |
CAA AGC TCA TGT GGA ACA CC | ||||
HS2 | XM_539153.2 | TTC AGA CAC CAT GCT TGA CC | 142 | 59.5 |
TCT CAC ACT GCT GAG GAA GG |
HPRT, hypoxanthine phophoribosyltransferase, TNF-α, tumor necrosis factor alpha; MMP-1, matrix metalloproteinase 1; MMP-2, matrix metallopeptidase 2; MMP-3, matrix metallopeptidase 3; HS3ST3A1, heparan sulfate d-glucosaminyl 3-O-sulfotransferase 3A1; IL-1β, interleukin-1β; HS2, hyaluronan synthase 2.
Tm, melting temperature.