Table 1. New mycobacteriophages described in this study.
Phage | Size (bp) | GC (%) | ORFs | tRNA (#) | tmRNA (#) | Ends | Accession | Cluster | Origins | Finder# |
Angelica | 59598 | 66.4 | 94 | 1 | 0 | 11-base 3′ | HM152764 | K1 | Clayton MO | Washington Univ. (SEA) |
Colbert | 67774 | 66.5 | 100 | 0 | 0 | Circ Perm | GQ303259.1 | B1 | Corvallis OR | Oregon State (SEA) |
CrimD | 59798 | 66.5 | 95 | 1 | 0 | 11-base 3′ | HM152767 | K1 | Williamsburg VA | Wm & Mary (SEA) |
Eagle | 51436 | 63.4 | 87 | 0 | 0 | 10-base 3′ | HM152766 | A4 | Fredericksburg VA | Mary Washington (SEA) |
ET08 | 155445 | 64.6 | 218 | 30 | 1 | Circ Perm | GQ303260.1 | C1 | La Jolla CA | UCSD (SEA) |
Hope | 41901 | 66.6 | 63 | 0 | 0 | 11-base 3′ | GQ303261.1 | G | Lithonia GA | Spelman College (SEA) |
Island3 | 47287 | 66.8 | 76 | 0 | 0 | 11-base 3′ | HM152765 | I1 | Pittsburgh PA | CMU (SEA) |
LeBron | 73453 | 58.8 | 123 | 9 | 0 | 10-base 3′ | HM152763 | Sin | Allensville NC | JMU (SEA) |
LRRHood | 154349 | 64.7 | 224 | 30 | 1 | Circ Perm | GQ303262.1 | C1 | Santa Cruz CA | UCSC (SEA) |
Peaches | 51376 | 63.9 | 86 | 0 | 0 | 10-base 3′ | GQ303263.1 | A4 | Monroe, LA | UL Monroe (SEA) |
Puhltonio | 68323 | 66.4 | 97 | 0 | 0 | Circ Perm | GQ303264.1 | B1 | Catonsville MD | UMBC (SEA) |
Pumpkin | 74491 | 63.0 | 143 | 2 | 0 | 9-base 3′ | GQ303265.1 | E | Holland MI | Hope College (SEA) |
UncleHowie | 68016 | 66.5 | 98 | 0 | 0 | Circ Perm | GQ303266.1 | B1 | University City MO | Washington Univ. (SEA) |
Fang | 68569 | 66.5 | 102 | 0 | 0 | Circ Perm | GU247133 | B1 | O'Hara Twp PA | S. Leuba (PHIRE) |
Phlyer | 69378 | 67.5 | 103 | 0 | 0 | Circ Perm | FJ641182.1 | B3 | Pittsburgh PA | D. Altman (PHIRE) |
RedRock | 53332 | 64.5 | 95 | 1 | 0 | 10-base 3′ | GU339467 | A2 | Sedona AZ | D. Jacobs-Sera |
Scoot17C | 68432 | 66.5 | 102 | 0 | 0 | Circ Perm | GU247134 | B1 | Pittsburgh PA | V. Hohenstein (PHIRE) |
Skipole | 53137 | 62.7 | 102 | 0 | 0 | 10-base 3′ | GU247132 | A1 | Champlin Park MN | S. Glennon (PHIRE) |
Finder is shown as either a participating institution in the Science Education Alliance (SEA), or a student in the Phage Hunters Integrating Research and Education (PHIRE) program at the University of Pittsburgh.