Table 1. Plasmids used in this study.
Plasmid | Relevant featuresa | Source/Reference |
pUS-DevRC | pET28a overexpressing DevR C-terminal domain cloned in NdeI site | This study |
pAV-DevR | pET28a overexpressing full length wild type DevR cloned in NdeI site | [12] |
pJFR19 | E. coli-Mycobacterium integrating shuttle plasmid with 3-kbacetamidase promoter, Hygr | [43] |
pFPV27 | E. coli-Mycobacterium shuttle plasmid with promoter less gfp, Kanr | [44] |
pET28a | E. coli expression vector (with N-terminal His6 tag), Kanr | Novagen |
pMG86 | pJFR19 containing devR-devS expressed from acetamidase promoter, Hygr | [45] |
pTGS | pFPV27 containing tgs1 promoter (-143 to +45), Kanr | [22] |
p3131 | pFPV27 containing Rv3131 promoter (-150 to +48), Kanr | [22] |
pSD POperon devR | pJFR19 containing devR (cloned between NdeI and XbaI sites), full-length DevR is expressed from Rv3134c-devRS operon promoter (-608 to +998, ref. 20) cloned in NdeI and BstBI sites | S.D.Majumdar and J.S.Tyagi, 2010, unpublished |
pUS POperon devRC | pJFR19 containing devRC (cloned between NdeI and XbaI sites), DevRC is expressed from Rv3134c-devRS operon promoter cloned in NdeI and BstBI sites | This study |
pUS PAcet devRC | pJFR19 containing devRC (cloned between NdeI and XbaI sites), DevRC expressed from constitutive acetamidase promoter cloned in NdeI and BstBI sites | This study |
pUS Phsp60 devRC | pJFR19 containing devRC (cloned between NdeI and XbaI sites), DevRC expressed from constitutive hsp60 promoter cloned in NdeI and BstBI sites | This study |
The coordinates of the promoters (in parentheses) are with reference to the transcription start point (TSP) of tgs1;
Hygr, hygromycin resistance;
Kanr, kanamycin resistance.