Table 2.
List of enriched KEGG pathways in each cluster detected by DPClus
| p-valuemin | Metabolism | |
|---|---|---|
| WT, roots | ||
| Clus1 | 0.0002 | Aminoacyl-tRNA biosynthesis |
| Clus2 | n.s. | - |
| Clus3 | 0.0061 | Steroid biosynthesis |
| Clus4 | 0.0186 | Galactose metabolism |
| Clus5 | 0.0041 | Carbon fixation in photosynthetic organisms |
| mto1, roots | ||
| Clu1 | 0.0021 | Alanine, aspartate and glutamate metabolism |
| Clu2 | 0.0311 | Ascorbate and aldarate metabolism |
| Clu3 | 0.0025 | Steroid biosynthesis |
| Clu4 | 0.0009 | Biosynthesis of unsaturated fatty acids |
| Clu5 | n.s. | - |
| tt4, roots | ||
| Clus1 | 0.0224 | Biosynthesis of alkaloids derived from shikimate pathway |
| Clus2 | 0.0102 | Steroid biosynthesis |
| Clus3 | 0.0012 | Nitrogen metabolism |
| Clus4 | 0.0139 | Purine metabolism |
| WT, aerial parts | ||
| Clus1 | 0.0017 | Galactose metabolism |
| Clus2 | 0.0422 | Biosynthesis of plant hormones |
| Clus3 | 0.0041 | Glucosinolate biosynthesis |
| Clus4 | 0.0220 | Glycerophospholipid metabolism |
| Clus5 | 0.0005 | Biosynthesis of unsaturated fatty acids |
| mto1, aerial parts | ||
| Clus1 | 0.0205 | Alanine, aspartate and glutamate metabolism |
| Clus2 | 0.0019 | Galactose metabolism |
| Clus3 | n.s. | - |
| Clus4 | 0.0146 | Tropane, piperidine and pyridine alkaloid biosynthesis |
| Clus5 | n.s. | - |
| Clus6 | n.s. | - |
| Clus7 | n.s. | - |
| tt4, aerial parts | ||
| Clus1 | 0.0197 | Aminoacyl-tRNA biosynthesis |
| Clus2 | 0.0038 | Steroid biosynthesis |
| Clus3 | 0.0000 | Galactose metabolism |
| Clus4 | 0.0045 | Biosynthesis of unsaturated fatty acids |
| Clus5 | n.s. | - |