. 2011 Jan 28;6(1):e14616. doi: 10.1371/journal.pone.0014616

Table 2. The differently expressed proteins identified based on two or more peptides in CD4⁺ T cells between active VKH patients and normal individuals.

Gene symbol	Swiss-prot accession No.	Identified proteins	Expression Ratio^a (VKH:NC)	Xcorr^b	t-test p	MH+ (Da)	Mass stdev (Da)	Identified Peptide
Up-regulated in VKH
VIM	B0YJC4	Vimentin	2.8	2.42	0.00004	1060.7690	0.08313	159 R.QVDQLTNDK.A 169
				5.53	0.00002	1169.9804	0.11453	129 K.ILLAELEQLK.G 140
				2.27	0.00061	1428.8390	0.13478	50 R.SLYASSPGGVYATR.S 65
				3.16	0.00031	1115.8539	0.14490	105 K.VELQELNDR.F 115
				3.36	0.00032	1323.8875	0.13155	196 R.EEAENTLQSFR.Q 208
				3.99	0.00045	1406.1375	0.30727	223 K.VESLQEEIAFLK.K 236
				3.30	0.00030	1533.9759	0.26803	222 R.KVESLQEEIAFLK.K 236
				3.30	0.00029	1312.8985	0.35813	207 R.QDVDNASLAR.L 218
				2.26	0.00061	1226.9591	0.20369	294 K.FADLSEAANR.N 305
KRT10	P13645	Keratin, type I cytoskeletal 10	2.0	2.26	0.00449	993.8803	0.14940	237 K.YENEVALR.Q 246
				2.49	0.00409	1435.8816	1.01701	439 K.IRLENEIQTYR.S 451
				3.40	0.00108	2083.0051	0.17698	422 R.AETECQNTEYQQLLDIK.I 440
				2.27	0.02983	1262.8610	0.14280	450 R.SLLEGEGSSGGGGR.G 465
				3.03	0.00403	1031.5372	0.57250	257 R.VLDELTLTK.A 267
				3.84	0.00012	1494.0186	0.19081	322 R.SQYEQLAEQNRK.D 335
				2.26	0.00448	1236.916	0.16415	165 R.ALEESNYELEGK.I 178
ATP5B	P06576	ATP synthase subunit beta, mitochondrial precursor	1.8	2.26	0.00433	1988.1477	0.17359	387 R.AIAELGIYPAVDPLDSTSR.I 407
				3.57	0.00622	975.7282	0.15882	201 K.IGLFGGAGVGK.T 213
				2.67	0.00022	1088.6165	0.50286	188 K.VVDLLAPYAK.G 199
ACTA2	P62736	Actin, aortic smooth muscle	1.8	3.83	0.01604	1354.8744	0.12513	52 K.DSYVGDEAQSKR.G 65
				3.12	0.00290	1198.7264	0.08676	52 K.DSYVGDEAQSK.R 64
KRT2	P62736	Keratin, type II cytoskeletal 2 epidermal	1.8	4.91	0.00099	1191.8102	0.09092	374 K.YEELQVTVGR.H 385
				4.89	0.00012	1461.0514	0.45310	302 K.VDLLNQEIEFLK.V 315
				3.95	0.00025	1372.6575	0.48309	441 K.LNDLEEALQQAK.E 454
KRT1	P04264	Keratin, type II cytoskeletal 1	1.6	2.24	0.00899	993.8803	0.14940	443 K.LNDLEDALQQAK.E 456
				4.70	0.00027	1435.8816	1.01701	343 R.SLDLDSIIAEVK.A 356
				3.08	0.00072	2083.0051	0.17698	185 K.SLNNQFASFIDK.V 198
ALB	A6NBZ8	Uncharacterized protein ALB	1.6	2.95	0.04948	1444.1611	0.54524	286 K.YICENQDSISSK.L 299
				3.08	0.00704	1512.1173	0.04618	438 K.VPQVSTPTLVEVSR.N 453
				2.95	0.04947	1078.9591	0.10821	499 K.CCTESLVNR.R 509
Down-regulated in VKH
SFRS1	Q07955	Isoform ASF-1 of Splicing factor, arginine/serine-rich 1	0.50	2.52	0.00007	1255.5932	0.37017	17 R.IYVGNLPPDIR.T 29
				2.78	0.03060	1078.9591	0.10822	154 R.DGTGVVEFVR.K 165
				3.37	0.00126	1417.7458	0.11825	142 R.EAGDVCYADVYR.D 155

a: average expression ratio;

b: cross-correlation score.

Table 2. The differently expressed proteins identified based on two or more peptides in CD4+ T cells between active VKH patients and normal individuals.

Table 2. The differently expressed proteins identified based on two or more peptides in CD4⁺ T cells between active VKH patients and normal individuals.